Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ------MQDFSSLLLKLQEYWKDQGCLVIQP-YDIPAGAGTFHPATLLRSLDKKPWNVAYVAPSRRPTDGRYGENPNRLGSY---YQFQVVIKPSPSNIQELYLKSLEVLGINLNEHD-----------IRFVEDNWESPTLGAWGLGWEVWLDGME------VTQFTYFQQVGGI-----PCSPIPVEITYGLER--------LTMYVQKV-----ENILEIEWAKKDNESVRYAQVHLESEYEFSKYHFEVASVERLLEMFKNAQAEALHCLENKLPLPAYD----LVMLCSHFFNILDARKAISVAERQN---YIL-------------QIRDLAKGCAVLYKEQ-----------EEEREERLKNALTKA---------------- |
1IR6 Chain:A ((10-394)) | PLALLPLKGLREAAALLEEALRQGKRIRVHGDYD---ADGLTGTAILVRGLAALGADVHPFIPHRLEEG--YGVLMERVPEHLEASDLFLTVDCGITNHAELRELLENGVEVIVTDHHTPGKTPPPGLVVHPALTPDLKEKPTGAGVAFLLLWALHERLGLPPPLEYADLAAVGTIADVAPLWGWNRALVKEGLARIPASSWVGLRLLAEAVGYTGKAVEVAFRIAPRINAASRLGEAEKALRLLLTDDAAEAQALVGELHRLNARRQTLEEAMLRKLLPQADPEAKAIVLLDPEGHPGVMGIVASRILEATLRPVFLVAQGKGTVRSLAPISAVEALRSAEDLLLRYGGHKEAAGFAMDEALFPAFKARVEAYAARFPDPVREVALLDL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IR6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -67267 for 2374 contacts (-28.3/contact) +
2D Compatibility (PS) -31374 + (NN) -15298 + (LL) 136
1D Compatibility (HY) -4400 + (ID) 2200
Total energy: -120403.0 ( -50.72 by residue)
QMean score : 0.321
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