Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceLTNNHYYTNDETIKHNRKTWQVMLKGFNMSFTSDNGVFSKNTVDFGSKLLIESFELETKIGKILDVGCGYGPMGLTVAKAFPDSQIEMVDVNLRALELAKENAEINKITNTHIYESSVYDNVTANDYQAIISNPPIRAG----KKIVHAILEGAYDHLQETGELWIVIQKKQGGPSAEKKMEEVFGNVETVAKDKGYFIFKSVKN
2PJD Chain:A ((167-336))----------------------------LTVKTLPGVFSRDGLDVGSQLLLSTLTPH-TKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGV-EGEVFASNVFSE-VKGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANAFLPYP---DVLDETFGFHEVIAQTGRFKVYRAIM-


General information:
TITO was launched using:
RESULT:

Template: 2PJD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9655 for 1337 contacts (-7.2/contact) +
2D Compatibility (PS) -17403 + (NN) -5966 + (LL) 2300
1D Compatibility (HY) -4800 + (ID) 1550
Total energy: -37074.0 ( -27.73 by residue)
QMean score : 0.350

(partial model without unconserved sides chains):
PDB file : Tito_2PJD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2PJD-query.scw
PDB file : Tito_Scwrl_2PJD.pdb: