Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LTNNHYYTNDETIKHNRKTWQVMLKGFNMSFTSDNGVFSKNTVDFGSKLLIESFELETKIGKILDVGCGYGPMGLTVAKAFPDSQIEMVDVNLRALELAKENAEINKITNTHIYESSVYDNVTANDYQAIISNPPIRAG----KKIVHAILEGAYDHLQETGELWIVIQKKQGGPSAEKKMEEVFGNVETVAKDKGYFIFKSVKN |
2PJD Chain:A ((167-336)) | ----------------------------LTVKTLPGVFSRDGLDVGSQLLLSTLTPH-TKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGV-EGEVFASNVFSE-VKGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANAFLPYP---DVLDETFGFHEVIAQTGRFKVYRAIM- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PJD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9655 for 1337 contacts (-7.2/contact) +
2D Compatibility (PS) -17403 + (NN) -5966 + (LL) 2300
1D Compatibility (HY) -4800 + (ID) 1550
Total energy: -37074.0 ( -27.73 by residue)
QMean score : 0.350
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