Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VNNPKPCEWKSNELSRG---YIADYKAFNFVDGEGVRCSLYVSGCPFHCEGC--YNKAAQSFKYGKPYTKELEDDILKDIGHES------------VQGLTLLGGEPFLNTATCLSIVKRIRATYGETKDIWSWTGYTWDEMMQETADKLELLSLIDVLVDGRFEQKLFDPNLAFRGSSNQRIIDVQKSLAAGEVVLYEL------------------------ |
| 4I17 Chain:A ((4-226)) | TTDPNQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDVTSKKWKTDALYSLGVLFYNNGADVLRKATPLASSNKEKYASEKAKADAAFKKAVDYLGEAVTLSPNRTEIKQMQDQVKAMI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4I17.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4449 for 1363 contacts (-3.3/contact) +
2D Compatibility (PS) -18405 + (NN) 932 + (LL) 0
1D Compatibility (HY) 3200 + (ID) 1200
Total energy: -19922.0 ( -14.62 by residue)
QMean score : 0.107
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