Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LHKLSVVIAVYNVSEYIEACLTSVLEQNYK-NVELIIVNDGSTDDTFQKVEKLVDGHTNVILIDQ--------ENQGVSAVRNNGVKAATGDYLGFVDGDDII-AKDMFQKMMDSFEMS-DADMVTIGVARLSGDKVYPSTLHERYMVE--KKEATTIEETPALLYDTTSWNKVFKKSFWDKHHLEFPEGQMYEDIALMIPAF-LYAEK-VNIIPDVGYYWRSREGGAKSITQRRNDIAMVNDRLLALKKVNQVLNEKNIQGDLRYQNERKNFEIDLFSMIEWAFLAPKDYYLALQPLIKNYVEQEMKTTALNDIPKEKKRLFKALLANNRPAFLLNSYIYFGKKAVKKITK |
| 3CKJ Chain:A ((47-265)) | GRTISVVLPALDEEDTIGSVIDSISPLVDGLVDELIVLDSGSTDDTEIRAVAAG-----ARVVSREQALPEVPIRPGKGEALWRSLAASRGDIVVFVDSDLINPHPMFVPWLVGPLLTGDGVHLVKSFYRRP-----------GRVTELVARPLLAALRPELGCILQPLGGEYAATRELLTSVP--FAPGY-GVEIGLLVDTFDRLGLDAIAQVNLGVREHRN--------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CKJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96924 for 1517 contacts (-63.9/contact) +
2D Compatibility (PS) -20453 + (NN) -5788 + (LL) 10652
1D Compatibility (HY) -5600 + (ID) 1600
Total energy: -119713.0 ( -78.91 by residue)
QMean score : 0.345
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