Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNSFQIKTKVAFGTNSLQVLKEIKN------KNVWIICDRFLADGEGLQGLIGQLDASN-NVHIFTDVVPDPPISKVAGGVSEAGKIQPQVMIAFGGGSAIDTAKGIYYFA------KRLEKINISTFIAIP-----TTSGTGSEVTAATVITDPTTKIKYPLFLDELIPDMAILDAQLVVTVPPAITANTGMDVLTHAIEAYVSKDASDYTDALGEKSVQLTLRFLTSCYDDGRNLADREKMHNASTMAGMAFNCANLGLNHSIAHQLGAQFHVPHGLANAILLDAVIRFNA--FKNRETEQKYAEMARICGIASRSDSNET--AVRLLRERIVAMMEHMQMPRTLTDAGVAKEKVYAKMDEIATNALKDACLPTSPTTPTHQELKEILEQII |
| 3OX4 Chain:B ((4-379)) | -STFYIPFVNEMGEGSLE--KAIKDLNGSGFKNALIVSDAFMNKSGVVKQVADLLKAQGINSAVYDGVMPNPTVTAVLEGLKILKDNNSDFVISLGGGSPHDCAKAIALVATNGGEVKDYEGIDKSKKPALPLMSINTTAGTASEMTRFCIITDEVRHVKMAIVDRHVTPMVSVNDPLLMVGMPKGLTAATGMDALTHAFEAYSSTAATPITDACALKAASMIAKNLKTACDNGKDMPAREAMAYAQFLAGMAFNNASLGYVHAMAHQLGGYYNLPHGVCNAVLLPHVLAYNASVVAGRLKDVGVAMGLDIANLGDKEGAEATIQAVRDLAASI-------GIPANLTELGAKKEDV----PLLADHALKDACALTNPRQGDQKEVEELF---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OX4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -162308 for 3285 contacts (-49.4/contact) +
2D Compatibility (PS) -37726 + (NN) -7826 + (LL) 2824
1D Compatibility (HY) -24800 + (ID) 6550
Total energy: -236386.0 ( -71.96 by residue)
QMean score : 0.454
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