Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MGNYVALLRAVNVAGKNKVNMKNLKGALEEEGFQNVV-----TYIQSGNLVLSSILQTETEVAAKITKVIKAICELTIDVFVFSEQNYKQIIANNPFPPETIGEEERWMAAFY--NENIDIPRQKNDQAEVIAIGRVLYVHVFSNQIHTLKLP-----VFLGQYKMALTTTRNWRTTLQLKTLLDSQE
4O1S Chain:A ((1-170))
SGGKAVSGETPVYLADGKTIKIKDLYSSERKKEDNIVEAGSGEEIIHLKDPIQIYSYVDGTIVRSRSRLLYKGKSSYLVRIETIGGRSVSVT-PVHKLFVLTEKGIEEVMASNLKVGDMIAAVAESASEATFDRVKSIAYEKG-DFDVYDLSVPEYGRNFIGGEGLLVLHNA-----------------
General information:
TITO was launched using:
RESULT:
Template:
4O1S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -68421 for 1222 contacts (-56.0/contact) +
2D Compatibility (PS) -17008 + (NN) 5840 + (LL) 1776
1D Compatibility (HY) -4000 + (ID) 1100
Total energy: -82913.0 ( -67.85 by residue)
QMean score : 0.189
(partial model without unconserved sides chains):
PDB file :
Tito_4O1S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4O1S-query.scw
PDB file :
Tito_Scwrl_4O1S.pdb
: