Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTYIEILGQNAKKASQ---SVARLSTASKNEILRDLARNIVADTETILTENARDVAKAKDNGISEIMVDRLRLNKDRIQAIANGIYQVADLADPI-GQVVSGYTNLDGLKILKKRVPLGVIAMIFE-SRPNV-SVDAFSLAFKTGNAIILRGGKDAIFSNTALVNCMRQTLQDTGHNPDIVQLVEDTSHVVAEELMQATDYVDVLIPRGGAKLIQTVKEK----SKIPVIETGVGNVHIYIDEFADLDMAAKIVINAKTQR-PSVCNAAEGLVVHQAIAKGFLSQLEKMLKESNQSVEFRADEE----------------------------------------ALQLL--ENAVA---ASESDYATEFLDYIMSVKVVDSFEQAISWINKYSSHHSEAIITNNISRAEIFQDMVDAAAVYVNASTRFTDGFVFGLGAEIGISTQKLHARGPMGLEALTSTKYYINGTGQVRE |
| 1O04 Chain:A ((57-498)) | -EDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKP----YVISYLVD-------LDMVLKCLRYYAGWADKYHGKTIP---IDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEA----GFPPGVVNIVPGFG-PTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKS----RVV-GNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGR----ELGEYGLQAYTEVKTVTVKVPQKNS |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1O04.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -190146 for 3317 contacts (-57.3/contact) +
2D Compatibility (PS) -41868 + (NN) -13239 + (LL) 1180
1D Compatibility (HY) -10800 + (ID) 3400
Total energy: -258273.0 ( -77.86 by residue)
QMean score : 0.464
|
|
|