Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MASIIYSPKDIFEQDFKVSMRGYDKKEVDVFLDDVIKDYENYLEQIEKLQMENRRLQQALDKKESEASNVRNSGTAMYNQKPIAQSATNFDILKRISRLEKEVFGRQIRE
1DEB Chain:A ((1-54))
----------------------------------AAASYDQLLKQVEALKMENSNLRQELEDNSNHLTKLETEASNMKEVLKQLQGSI----------------------
General information:
TITO was launched using:
RESULT:
Template:
1DEB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5771 for 210 contacts (27.5/contact) +
2D Compatibility (PS) -5951 + (NN) -1744 + (LL) 4360
1D Compatibility (HY) -2400 + (ID) 650
Total energy: -614.0 ( -2.92 by residue)
QMean score : 0.475
(partial model without unconserved sides chains):
PDB file :
Tito_1DEB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DEB-query.scw
PDB file :
Tito_Scwrl_1DEB.pdb
: