Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----------------------MKQAETLTSLEQVLKQIKYSLDSYYSFCVKKGFVLKVI-----PVRENIEEVSYLLNMIESQ---KDTEISTYYVDKLSKQLKEFVKKLNSWEVKPLFTSEQLSKLTTYSTFLENKE
1I6Z Chain:A ((85-219))
GSPEFMLIGEKSNPEEEVELKKLKDLEVSAEKIANHLQELNKELSGIQQGFLAKELQAEALCKLDRKVKATIEQFMKILEEIDTMVLPEQFKDSRLKRKNLVKKVQVFLAECDTVEQYICQETERLQ-----STNLALAE
General information:
TITO was launched using:
RESULT:
Template:
1I6Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26368 for 589 contacts (-44.8/contact) +
2D Compatibility (PS) -10960 + (NN) -4848 + (LL) 436
1D Compatibility (HY) -3200 + (ID) 950
Total energy: -45890.0 ( -77.91 by residue)
QMean score : 0.595
(partial model without unconserved sides chains):
PDB file :
Tito_1I6Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1I6Z-query.scw
PDB file :
Tito_Scwrl_1I6Z.pdb
: