Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRIQTTNLDKGGGGKSSHTYNEGDWLSRVMGKRVLLIDGARECNLTHSFDVTSDKTIYDI--FITGEYEICRINDKLSLIRGDERLTDEQLDLASRNNKYLQLF-----------------MWFSEHYEELAEQ-FDIILIDTHNDESLVTANCIAVSDIVLGVTDASTNGFRAWLALKKFVDDIKNEAIEVITKKSYVKAEAYLIGNKIEYYGNNVTETCKQFLDVVQEDEAYLGSIQKKELMAKSLVINQSVFEQREHMTEKQKQDHQKFYDNIEYVYQNILTVLEGETK |
| 3KJH Chain:A ((1-254)) | MKLAVA--GKGGVGKTTVAAGLIKIMAS-DYDKIYAVDGDPDSCLGQTLGL-SIEEAYAITPLIEMKDEIREKTGDGGLLILNPKVDGDLDKYGRYIDDKIFLIRMGEIKKGGSQCYCRENSFLGSVVSALFLDKKEAVVMDMGAGIEHLTRGTAKAVDMMIAVIEPNLNSIKTGLNIEKLAGDLGIKKVRYVINKVRNIKEEKLIKKHLP-------------------EDKILGIIPYNELFIELSLKGEEIWQST---------------NPAFVNLHDIYQKLRLEVG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KJH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -56114 for 1917 contacts (-29.3/contact) +
2D Compatibility (PS) -24429 + (NN) -2413 + (LL) 2928
1D Compatibility (HY) -12000 + (ID) 1900
Total energy: -93928.0 ( -49.00 by residue)
QMean score : 0.252
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