Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIIIIGAQASGKMTIGQEIAKQTGMTLFHNHDSIDFVLRF-----MPW-SPDSIALTESIRFKFFETFAKTGQK-MIFTIVIDFNDSRDVVFLEKIQTVFQSHNQEVLFVELETELSERLKRNRTENRLKHKPSKRD-IKWSENDICLTMDYAIFNPEVAPEALTYYHKINNTCLTATETAYLIIQKINQIKEKN
2PT5 Chain:A ((1-164))
MRIYLIGFMCSGKSTVGSLLSRSLNIPFYDVDEEVQKREGLSIPQIFEKKGEAYFRK---LEFEVLKDLSE-KENVVISTGGGLGA---NEEAL----NFMKSR---GTTVFIDIPFEVFLERCKDSKER---PLLKRPLDEIKNLFEERRKIYS----------KADIKVKGEK-PPEEVVKEILLSLEGNAL--
General information:
TITO was launched using:
RESULT:
Template:
2PT5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -97329 for 1209 contacts (-80.5/contact) +
2D Compatibility (PS) -16768 + (NN) -4128 + (LL) 1964
1D Compatibility (HY) -2400 + (ID) 1100
Total energy: -119761.0 ( -99.06 by residue)
QMean score : 0.458
(partial model without unconserved sides chains):
PDB file :
Tito_2PT5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2PT5-query.scw
PDB file :
Tito_Scwrl_2PT5.pdb
: