Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNIKRHSIFLWLTTSILAILMAVGMTIYFNTYQASPLARRIAKTATNHKNYLLFRSKGKVKANIIFYQGALVEEEAYSQLARDLADKGYNTYILKTPLNLPVLS----------PHKAKTIINQNHLTNVYLAGHSLGGVVASQNAK--VAPVRGLILLASYPSRK----------------------------------------------------------------------SDLSHKKLRVLSITASNDHILNWEKYEEAKKRLPNSSTFRTIVGGNHSRFGNYGHQKGDGKATLSHKSSEKQLATFISNFIH |
| 3OM8 Chain:A ((26-265)) | -----------------------------------------------------------EKPLLALSNSIGTTLHMWDAQLPALTR-HFRVLRYDARGHGASSVPPGPYTLARLGEDVLELLDALEVRRAHFLGLSLGGIVGQWLALHAPQRIERLVLANTSAWLGPAAQWDERIAAVLQAEDMSETAAGFLGNWFPPALLERAEPVVERFRAMLMATNRHGLAGSFAAVRDTDLRAQLARIERPTLVIAGAYDTVTAASHGELIAASIA-GARLVTLP-AVHLS----------------NVEFPQAFEGAVLSFLG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OM8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -65281 for 1320 contacts (-49.5/contact) +
2D Compatibility (PS) -16747 + (NN) -5431 + (LL) 5116
1D Compatibility (HY) -2400 + (ID) 950
Total energy: -85693.0 ( -64.92 by residue)
QMean score : 0.441
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