Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLIGIVGTNSNKSTNRQLLQYMQQHFAD-KAEIELIEVKDLPL-FNKPADKNVPQVILDIAAKIEEADGVIIGTPEYDHSIPSALMSVLAWLSYGI---YPLLNKPVMITGASYGTLGSSRAQLQLRQILNAPELKASVLPDEFLLSHSLQAFDKDGNLHDIETSQKLDAIFDDFRLFVKITGKLSNARDLLQKEAENFDWESL
2Q62 Chain:A ((35-225))
PRILILYGSLRTVSYSRLLAEEARRLLEFFGAEVKVFDPSGLPLPDAAP---VSHPKVQELRELSIWSEGQVWVSPERHGAMTGIMKAQIDWIPLSTGSIRPTQGKTLAVMQVSGG-SQSFNAVNQMRILGR--WMRMITIPNQSSVAKAFQEFDANGRMKPSSYYDRVVDVMEELVKFTLLTRDCSAYLTDRYSERKE------
General information:
TITO was launched using:
RESULT:
Template:
2Q62.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -120890 for 1523 contacts (-79.4/contact) +
2D Compatibility (PS) -20482 + (NN) -11619 + (LL) 528
1D Compatibility (HY) -2800 + (ID) 1550
Total energy: -156813.0 ( -102.96 by residue)
QMean score : 0.556
(partial model without unconserved sides chains):
PDB file :
Tito_2Q62.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Q62-query.scw
PDB file :
Tito_Scwrl_2Q62.pdb
: