Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNKGLIATLILLTILVVGELFYNKSEKHLNLSEKQVVKIGILQYV--PHDALDAIEKGVEDGLAQEGYKGKKVKLTVLNAEADQSKIQAMSKQLVN--HHNDILIGIATPS-----AQGLAASTKDTPIIMGAVSDPLGAKLVTNMKKPTTNVTGLSNVVPTKQTVQLIKDITPNV-----KRIGILY-ASSEDNSVSQVTEFTKYAQKAGLE-VLKYSV--PSTNEIKTSMSVM---TKKVDAVFVPQDNTIASAFRTVIVAANQ--ANIPVYSSVDTM-----VEQGSIASVAQSQYGLGLETAKQAIKVLRGKPVKDV-PVKVIDTGKPSLNLKAAKHLGIKIPKKIMKQAEITVKVDD |
| 3H75 Chain:A ((3-309)) | ------------------------------------LTSVVFLNPGNSTETFWVSYSQFMQAAARDLGLD-----LRILYAERDPQNTLQQARELFQGRDKPDYLMLVNEQYVAPQILRLSQG--SGIKLFIVNSPLTLDQR--------WIGSMVGDDEEAGYRMLKELLHKLGPVPAGHGIELLAFSGLKVTPAAQLRERGLRRALAEHPQVHLRQLVYGEWNRERAYRQAQQLLKRYPKTQLVWSANDEMALGAMQAARELGRKPGTDLLFSGVNSSPEALQALIDGKLSVLEAGHFTLGGWALVALHDDALGLDARRLGGPDWQLSLFQALTPAQARQLLRLGDQVGTRVDFRGLSAQG |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3H75.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -55202 for 2174 contacts (-25.4/contact) +
2D Compatibility (PS) -29136 + (NN) -13772 + (LL) 4012
1D Compatibility (HY) -1200 + (ID) 1150
Total energy: -96448.0 ( -44.36 by residue)
QMean score : 0.433
|
|
|