Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKRASGVLMHITSLPGDLGIGTFGREAYAFVDFLVETDQKFWQILPLTTTSFGDSP--YQSFSAVAGNTHLIDFDLLTLEGFISKDDYQNIS----FGQDPEVVDYAGLFEKRRPVLEKAVKNFLQEERATRMLSDFLQEEKWVTDFAEFMAIKEHFGNKALQEWDDKAIIRREEEALAGYRQKLSEVIKYHEVTQYFF-YKQWFELKEYANDKGIQIIGD---MPIYVSADSVEVWTMPELFKLDRDKQPLAIA--------GVPADDFSDDGQLWGNPIYNWDYHKESDFDWWIYRIQSGVKMYDYLRIDHFKGFSDYWEIRGDYQTANDGSWQPAPG-----PELFATIKEKLGDLPIIAENLGYIDERAERLLAG------TGFPGM-KIMEFGFYDTTGNSIDIPHNYTENTIAYAGTHDN------EVINGWFENLTVEQKAYAENYMRRLPNEPITETVLRTLYAT-VSQTTITCMQDLLDKPADSRMNMPNTVGGNWQWRMRKEDLTENRK-AFLKEITTIYNRGNK- |
| 4TQT Chain:A ((14-490)) | ----ASKVIKGGTVITAD-------RTFRA--DILIEDGKIAAIGDSLEGDEVIDASGCYVMPGGIDPHTHL----QMPFMGTYSSDDFDTGTAAALAGGTTMVVDFVLPDSEGN--LLDALQEWFQKAGKAR------------TDYSFHMAI---------TGWN------------ERTFNEMAEVVKRGINTFHFMAYKGALMVNDDEMFASFQRCAELGAMPLVHAENGDIVAQLQAKLMAEGNDGPEAHAYSRPPEVEGEATNRAIMIADQAGVPLYVVHVSCEQSHEAIRRARQKGMRVFGEPLIQHLTLDESEYHNR-DWDYAARRVMSPPFRDKLNQDSLWAGLAA--GSLQCVATDHCAFTTEQKRYGIGNFTKIPNGTGGLEERMPVLWTRGVRTGRLTPNEFVAVTSTNIAKILNIYPQKGAVVPGADADLVIWDPETTKKISAKTQHSSIDYNVFEGFELKGLPIMTLSRGRIAFDKGQVTAKP------GDGRFIEREPNGAVNRALSQWKEIVAPRKVERSA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TQT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1550 for 3738 contacts (-0.4/contact) +
2D Compatibility (PS) -44954 + (NN) -3072 + (LL) 4348
1D Compatibility (HY) -5600 + (ID) 4450
Total energy: -55278.0 ( -14.79 by residue)
QMean score : 0.159
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