Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLQNIGQTGIQATRIALGCMRMSDLEGKQAEEVVGTALDLGINFFDHADIYGGGLSELRFRDAIKHLNVNRDKMIIQSKCGIREGYFDFSKEYILSSVDGILERLGTEYLDFLILHRPDVLVEPEEVAEAFTKLRAEGKVKHFGVSNQNRFQMELLQSYLDEPLAVNQLQLSPAHTPMFDAGLNVNMLNKASIEHDDGIVDYCRLKRVTIQAWSPFQIDLSRGLFVNHPDYKELNETIAKLAKNYNVSSEAIVIAWILRHPAQIQAIVGSMNPSRLKAIDKANDIALTREEWYDIYRSAGNILP |
| 1VBJ Chain:A ((11-266)) | --SLKLSNGVMMPVLGFGMWKLQD--GNEAETATMWAIKSGYRHIDTAAIYKN---EESAGRAIASCGVPREELFVTTKLWNS----DQGYESTLSAFEKSIKKLGLEYVDLYLIHWPGKDK-FIDTWKAFEKLYADKKVRAIGVSNFHEHHIEELLKHCKVAPMVNQIELHPLLNQ-------------------KALCEYCKSKNIAVTAWSP----LGQGHLVED-------ARLKAIGGKYGKTAAQVMLRWEIQAGV--ITIPKSGNEARIKENGNIFDFELTAEDIQVIDGMNAGHRY |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1VBJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -143038 for 2226 contacts (-64.3/contact) +
2D Compatibility (PS) -27749 + (NN) -12101 + (LL) 2948
1D Compatibility (HY) -13600 + (ID) 3450
Total energy: -196990.0 ( -88.50 by residue)
QMean score : 0.483
|
|
|