Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ------------------MQGRIVKSLAGFYYVESD--GVVYQTRARG-NFRKKGQIPYVGDWVEFSSQDQSEGYILSIEERKNSLVRPPIVNIDQAVVIMSAKEPDFNANLLDRFLVLLEYKMIQPIIY----ISKLDLLDDL-VVIDDIREHYQNIGY---------VFCYSQEELL----PLLADKVTVFMGQTGVGKS-------TLLNKIAPELKLETGEIS----DSLGRGR--HTTRAVSFYNVHKGKIADTPGFSSLDYEVDNAEDLNESFPELRRLSHFCKFRSCTHTHEPKCAVKEALTQGQLWQVRYDNYLQFLSEIENRRETYKKVIKRK |
4LK4 Chain:A ((10-350)) | RIINGSNANSAEWPSIVALVKRGADAYQGQFCGGSFLGGRYVLTAAHCFDSRSAASVDVIIGAYDLNNSSQGERIAAQKIYRHLSYSPSNLLN-DIAIVELAQTSSLPAITLAGPA-TRTSLPALTPLTVAGWGITFTPILQEVDVDLVSQSLCQIVMQHGISSDPNSTNFCAARLTQGDAGGPIVVKTGREQLGIVSWGDEQGTYGVYTNVSYFRDWITKHTNQLSYDQVANLGIRPLGKVSQSFTYTNLDAN---------ALTYTGNTFSSLP---ADFSVLSDGCSTKVTLATGE-SCSVEVAVDAQHYRQYQYDFELIFSYAGGSKRATSRIQLDT- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LK4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -34878 for 1996 contacts (-17.5/contact) +
2D Compatibility (PS) -28537 + (NN) 5450 + (LL) 692
1D Compatibility (HY) -5600 + (ID) 2450
Total energy: -65323.0 ( -32.73 by residue)
QMean score : 0.155
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