Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKILFFGEPLIRITPKENDYFAD--SISTKLFYGGSEVNTARALQGFGQDTKLLSALPNNPIGNSFLQFLKAQGIDTHSIQW-VGERVGLYFLEDSFACRKGEVVYDRDHSSLHDFRINQIDFDQLFEGVSLFHFSGITLSLDESIQEITLLLLKEAKKREITISLDLNFRSKLISPKNAKILFSQFATFADICFGIEPLMVDS-QDTTFFNRDEATIEDVKERMISLINHFDFQVIFHTKRLQDEWGRNHYQAYIANRKQEFVTSKEITTAVNQRIGSGDAFVAGALYQLLQHSDSKTVIDFAVASASLKCALEGDNMFETV-TAVNKVLNQSKDIIR |
| 3IQ0 Chain:A ((4-313)) | -SKVFTIGEILVEIMASKIGQPFDQPGIWNGPYPSGAPAIFIDQVTRLGVPCGIISCVGNDGFGDINIHRLAADGVDIRGISVLPLEATGSAFVTYHN----RDFIFNIKNAACGKLSAQHVDEN-ILKDCTHFHIMGSSLF-SFHMVDAVKKAVTIVKANGGVISFDPNIRKEMLDIPEMRDALHFVLELTDIYMPSEGEVLLLSPHS-----------TPERAIAGFLEE-GVK-----EVIVKRGNQG---ASYYSAN-EQFHVESYPVEEVDPTGAGDCFGGAWIACRQLGFDAHRALQYANACGALAVTRRGPMEGTSRLMEIETFIQRH----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IQ0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109946 for 2710 contacts (-40.6/contact) +
2D Compatibility (PS) -32101 + (NN) -9701 + (LL) 3364
1D Compatibility (HY) -8400 + (ID) 2300
Total energy: -159084.0 ( -58.70 by residue)
QMean score : 0.437
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