Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYSFEELLATMTLITAAEIEDKIDSNQDFVLFIGRISCPFCHLFVPKIVEVADEDE------FELFHLDSEDFDHWTANKEFRNKYDIPTVPGLMVVKNGTIKVKCDSKMTKEEIREFIG----
1A8L Chain:? ((120-226))
---------NLMDETKQAIR-NIDQDVRILVFVTP-TCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIE------YPEWADQYNVMAVPKIVIQVNGEDRVEFEGAYPEKMFLEKLLSALS
General information:
TITO was launched using:
RESULT:
Template:
1A8L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56444 for 691 contacts (-81.7/contact) +
2D Compatibility (PS) -10620 + (NN) -4906 + (LL) 1688
1D Compatibility (HY) -7200 + (ID) 1000
Total energy: -78482.0 ( -113.58 by residue)
QMean score : 0.394
(partial model without unconserved sides chains):
PDB file :
Tito_1A8L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1A8L-query.scw
PDB file :
Tito_Scwrl_1A8L.pdb
: