Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MADVKVVNN----EDSRGQKQDLKAKLFHIKIGSVPLPVY--VCLALLILLAGFLQKLPVNMLGG-------FAVILTMGWFLGTIGASIPGFKNFGGPAILSLLVPSILVFFNLINKNVLESTNMLMKQANFLYFYIACLVSGSIL--GMNRKMLIQGLLRMIFPMLLGMVCAMMVGTFV-GVILGLEWRHTLFYIVTPVLAGGIGEGILPLSLGYSSITGVASEQLVAQLIPATIIGNFFAILCTALLNRLGEKKPHLSGQGQLVRLNKGEDMSDIIADHSGPIDVKKMGGGVLTACSLFIFGHLLQQLTGFPGPVLMIVAAAILKYINVIPRETQNGAKQLYKFISGNFTFPLMAGLGLLYIPLKDVVATLSIQYFIVVISVVFTVISVGFFVSRFLNMNPVEAGIISACQSGMGGTGDVAILSTADRMNLMPFAQVATRLGGAITVITMTAILRMLF |
| 4IC4 Chain:A ((26-397)) | -KSVTRRNDIPEAAASPPSLLSFLRKNVGKDLSSIAMPVTSNEPISILQLISETFEYAPLLTKATQRPDPITFVSAFAISFLSIYRDKTRTLRKPFNPLLAETFELIREDMGFRLISEKVSHRPPVFAFFAEHLDWECSYTVTPSQKFWGKSIELNNEGILRLKFKTTGELFEWTQPTTILKNLIAGERYMEPVNEFEVHSSKGDKSHILFDKAGMFSG----RSEGFKVSIIPPP-----------------SSNRKKETLAGKWTQSLANETTHETIWEVGDLVSNPKKKYG------FTKFTANLNEITEIEKGNLPPTDSRLRPDIRAYEEGNVDKAEEWKLKLEQLQRERRNKG------------QDVEPKYFEKVSKNEWKYI-----------------------------TGPKSYWERRKKHDWSDISQLW-------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4IC4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -285872 for 2806 contacts (-101.9/contact) +
2D Compatibility (PS) -36158 + (NN) 7048 + (LL) 7480
1D Compatibility (HY) 2400 + (ID) 2700
Total energy: -307802.0 ( -109.69 by residue)
QMean score : 0.147
|
|
|