Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRITIFCGASTGENPVYSEKTVALAQWMAQNKHSLVYGGGKV-GLMGVMADTVIANGGYTTGVIPTFLRDREIAHENLSELIIVNNMPERKAKMMLLGDAFIALPGGPGTLEEISEVISWSRIGQNDNPCILYNVNGYFNDLKNMFDHMVGEGFLSLEDRENVLFSDDITEIEDFITNYKVPSTRQY
3SBX Chain:A ((14-188))
WTVAVYCAAAP-THPELLELAGAVGAAIAARGWTLVW-GGGHVSAMGAVSSAARAHGGWTVGVIPKMLVHRELADHDADELVVTETMWERKQVMEDRANAFITLPGGVGTLDELLDVWTEGYLGMHDKSIVVLDPWGHFDGLRAWLSELADTGYVSRTAMERLIVVDNLDDALQACAP---------
General information:
TITO was launched using:
RESULT:
Template:
3SBX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -124708 for 1439 contacts (-86.7/contact) +
2D Compatibility (PS) -19609 + (NN) -10291 + (LL) 28
1D Compatibility (HY) -11200 + (ID) 2600
Total energy: -168380.0 ( -117.01 by residue)
QMean score : 0.455
(partial model without unconserved sides chains):
PDB file :
Tito_3SBX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3SBX-query.scw
PDB file :
Tito_Scwrl_3SBX.pdb
: