Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNKVQERRERKIKEAIKAKNWDEVTRLLQQEQSNAERRDRYHNRRIKDETIASKNAKKSVRYDVIASSDLNPEEALILEELRQAIREAKASLSEIDSKIVEMIAEQGSSYKETARYITEHYKKMSDVTVKSHYCKALKKLAPLLKAYR
1FSE Chain:A ((8-55))
----------------------------------------------------------------------------------------SKPLLTKREREVFELL-VQDKTTKE----IA-SELFISEKTVRNHISNAMQKLGVKGRSQA
General information:
TITO was launched using:
RESULT:
Template:
1FSE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8251 for 291 contacts (-28.4/contact) +
2D Compatibility (PS) -4877 + (NN) -877 + (LL) 8192
1D Compatibility (HY) -2400 + (ID) 700
Total energy: -8913.0 ( -30.63 by residue)
QMean score : 0.397
(partial model without unconserved sides chains):
PDB file :
Tito_1FSE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FSE-query.scw
PDB file :
Tito_Scwrl_1FSE.pdb
: