Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNVKKHHLAYGAITLVALFSCILAVMVIFKSSQVTTESLSKADKVRVAKKSKMTKATSKSKVEDVKQAPKPSQASNEAPKSSSQSTEANSQQQVTASEEAAVEQAVVTENTPATSQAQQAYAVTETTYRPAQHQTSGQVLSNGNTAGAIGSAAAAQMAAATGVPQSTWEHIIARESNGNPNVANA-----SGASGLFQTMPG-WGSTA-------------------TVQDQVNSAIKAYRAQGLSAWGY |
| 2FBD Chain:A ((19-106)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------KSELPQWTCIAEHESSYRTNVVGPTNSNGSNDYGIFQINNYYWCQPSNGRFSYNECHLSCDALLTDNISNSVTCARKIKSQQGWTAWST |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FBD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9198 for 382 contacts (-24.1/contact) +
2D Compatibility (PS) -6718 + (NN) -2389 + (LL) 12400
1D Compatibility (HY) -2000 + (ID) 900
Total energy: -8805.0 ( -23.05 by residue)
QMean score : 0.438
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