Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRHPKIPILKLYNCLLVSIQWELDDQTALTFQEDLLNKIYETGANGVVIDLTSVDMIDSFIAKVLGDVITMSKLMGAKVVLTGIQPAVAVTLIELGIALEEI---ETALDLEQGLETLKRELGE
4DGF Chain:A ((21-128))----------PLGVEIYEINGPFFFGVADRLKGVLDVIEE--TPKVFILRMRRVPVIDATGMHALWEFQESCEKRGTILLLSGVSDRLYGALNRFGFIE-ALGEERVFDHIDKALAYAKLL---


General information:
TITO was launched using:
RESULT:

Template: 4DGF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 467 -103284 -221.16 -983.65
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -221.16
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.570

(partial model without unconserved sides chains):
PDB file : Tito_4DGF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4DGF-query.scw
PDB file : Tito_Scwrl_4DGF.pdb: