Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFQIGDNIVYPMHGAGIIEAIEEKEFLEEKQQYYVIRMSISNMTVMIPTSKILSSNIRPVTDILALKHIMHIFQHGE-SDRLLPWKQRYKINTDKIKTGEIQEGAE-VVRDLMRMKKEKALNASEKKMLDNAYEFLISELEVIKGITEKQIKSFG---------
4L5G Chain:A ((3-164))EFRPGDKVVLPPYGVGVVAGIAQRSVSGVSRAYYQVDFPGSRSKAYVPVEAPHSVGLRKALAPEEVPVILDLLKNGRMPLPK-QWAARHRKTSEILADGNPYRIAQMAGQ-LRAWEVERGLPDLDRQALRRAIHLLAEEVAQSLEITVQEAKRLFEEAWGEELN


General information:
TITO was launched using:
RESULT:

Template: 4L5G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 568 -62641 -110.28 -414.84
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -110.28
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.488

(partial model without unconserved sides chains):
PDB file : Tito_4L5G.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4L5G-query.scw
PDB file : Tito_Scwrl_4L5G.pdb: