Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTHPLFLEPVFKERLWGGTKLRDAFGYAIPSQKTGECWAVSAHAHGSSSVKNGPLAGKTLDQVWK-DHPE---------IFGFPDGKVFPLLVKLLDANMDLSVQVHPDDDYAKLHENGDLGKTECWYIIDCKDDAELILGHHASTKEEFKQRIESGDWNGLLRRIKIKPGDFFYVPSGTLH---ALCKGTLVLE-IQQ--NSDTTYRVYDYDRCNDQGQKRTLHIEKAMEVITIPHIDKVHTPEVKEVGNAEIIVYVQSDYFSVYKWKISGRAAFPSYQTYLLGSVLSGSGRIINNGIQYECNAGSHFILPAHFGEFTIEGTCEFMISHP
2Y0O Chain:A ((2-172))-------------------------------------GITKEEVNSYYQKAGIVLTDEEVDQIQLMDYGLGKERKVGLQLFVYVNTDRYCSKELVLFPGQTCPEHRHP-------PVDGQEGKQETFRCRY--GKVYLYVEGEKTPLPKVLPPQEDREHYTVWHEIELEPGGQYTIPPNTKHWFQAGEEGAVVTEMSSTSTDKHDIFTDPRILEHHH------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2Y0O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 705 -27866 -39.53 -179.78
target 2D structure prediction score : 0.43
Monomeric hydrophicity matching model chain A : 0.57

3D Compatibility (PKB) : -39.53
2D Compatibility (Sec. Struct. Predict.) : 0.43
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.252

(partial model without unconserved sides chains):
PDB file : Tito_2Y0O.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2Y0O-query.scw
PDB file : Tito_Scwrl_2Y0O.pdb: