Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MGEAAYVTVSALTKYIKRKFDVDPHLENIWIKGE-LSNVKIHTRGHIYFTLKDENARMQSVMFARQSE---RLPFKPENGMKVLV----RGGISVYEP----SGNYQLYAKEMQPDGVG---ALYL----AYEELKKKLAGEGLFDDRYKKQIPAFPATIGVVTSPTGAAVRDVITTLKRRYPLVKVIVLPALVQGENASRSIVTRIEEANEKEICDVLIVGRGGG-SIEELWAFNEEIVARAI-FASNIPIISAVGHETDFTISDFVADIRAATPTGAAEIAVP--HTTDLIERTKTAEVRMTRAMQQHLGQKKERIQTLQSSYAFR-----FPKRLYAQKEQQFDLAYQQFQAQLTALLDRKSRQLERETYRLEALHPHEQLKQARTRYQEQTNQLRKNMNIQMKQLHSQFQTVLGKLNALSPLQVMERGYSLAYKEDKLI-KSVSQIEEQDRLEIKLKDGVLTCEVLEKRGEEK 1Q9J Chain:A ((1-418)) ----------MFPGSVIRKLS---HSEEVFAQYEVFTSMTIQLRGVID---VDALSDAFDALLETHPVLASHLEQSSDGGWNLVADDLLHSGICVIDAELRLDQSVSLLHLQLILREGGAELTLYLHHCMADGHHGAVLVDE-LFSRYTDAVTTGDPGPITPQPTPL-----SMEAVLAQRGIRKAERFMSVMYAYPGLPQAVPVTRLWLSKQQTSDLMAFGREHRLSLNAVVAAAILLTEWQLRNTPHVPIPYVYPVDLRFVLAPPVAPTEATNLLGAASYLAEIGPNTDIVDLASDIVATLRADLANGVIQQSG----LHFGTAFEGTPPGLPPLVFCTDATSFP-------------------------------------------------TMRTPPGLEIEDIKGQFYCSIS-----VPLD----LYSCAVYAGQLIIEHHGHIAEPGKSLEAIRSLLCT--VPSEYG---

General information: TITO was launched using: RESULT: Template: 1Q9J.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1874 13643 7.28 38.00 target 2D structure prediction score : 0.42 Monomeric hydrophicity matching model chain A : 0.67 3D Compatibility (PKB) : 7.28 2D Compatibility (Sec. Struct. Predict.) : 0.42 1D Compatibility (Hydrophobicity) : 0.67 QMean score : 0.152

(partial model without unconserved sides chains): PDB file : Tito_1Q9J.pdb: (Unconserved sides chains are recalculated) : Sequence: align-1Q9J-query.scw PDB file : Tito_Scwrl_1Q9J.pdb: