Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTTTRTERNFAGIGDVRIVYDVWTPDTAPQAVVVLAHGLGEHAR--RYDHVAQRLGAAGLVTYALDHRGHGRSGGKRVLVRDISEYTADFDTLVGIATREYPGCKRIVLGHSMGGGIVFAYGVERPDNYDLMVLSAPAVAAQDLVSPVVAVAAKLLGVVVPGLPVQELDFTAISRDPEVVQAYNTDPLVHHGRVPAGIGRALLQVGETMPRRAPALTAPLLVLHGTDDRLIPIEGSRRLVECVGSADVQLKEYPGLYHEVFNE-PERNQVLDDVVAWLTERL |
3PFB Chain:A ((29-265)) | ------------RDGLQLVGTREEPFGEIYDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFNGHGDSDGKF-ENMTVLNEIEDANAILNYVKTDPHVRNIYLVGHAQGGVVASMLAGLYPDLIKKVVLLAPAATLKGDAL--EGNTQGV--TYNPD---------HI---PDRL-PFKD--LTL-----GGFYLRIAQQL-PIYEVSAQFTKPVCLIHGTDDTVVSPNASKKYDQIYQ--NSTLHLIEGADHCFSDSYQK--NAVNLTTDFLQ--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PFB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -206494 for 2074 contacts (-99.6/contact) +
2D Compatibility (PS) -24282 + (NN) -2787 + (LL) 2272
1D Compatibility (HY) -5600 + (ID) 2150
Total energy: -239041.0 ( -115.26 by residue)
QMean score : 0.473
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