Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKNPKDGESRTFLISVAAELAGMHAQTLRTYDRLGLVSPR-RTSGGGRRYSLHDVELLRQVQHLSQDEGVNLAGIKRIIELTSQVEALQSRLQEMAEELAVLRANQRREVAVVPKSTALVVWKPRR
3QAO Chain:A ((2-72))
----------NAMQIKELAELTGVSVRTLHHYDKIGLLVPQKDDWNGYRIYSEKDVDKLQQILFFKE-LDFPLKKIQQILDD---------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3QAO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37900 for 453 contacts (-83.7/contact) +
2D Compatibility (PS) -7559 + (NN) -1704 + (LL) 4852
1D Compatibility (HY) -5600 + (ID) 1150
Total energy: -49061.0 ( -108.30 by residue)
QMean score : 0.631
(partial model without unconserved sides chains):
PDB file :
Tito_3QAO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QAO-query.scw
PDB file :
Tito_Scwrl_3QAO.pdb
: