Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFKSLHQYAHVFSRLSLFGLAFAAAAQAQSQSLTVISFGGATKAAQEQAYFKPFERSGGGQVVAGEYNGEMAKVKAMVDVGKVSWDVVEVESPELLRGCDEGLFERLDPARFGDPAQFVPGTFSECGVATYVWSMVMAYDSTKLARAPQSWADFWNVREFPGKRGLRKGAKY-TLEVALLADGVKAEDLYKVLATPEGVSRAFAKLDQLKPNIQWWEAGAQPP-----QWLAAGDVVMSAAYNGRIAAAQKEGVKLAIVWPGS-------LYDPEYWAVVKGTPNKALAEKFIAFASQPQTQKVFSEQIPYGPVHKGTLALLPKTVQEALPTAPANLEGARAVDAEFWVDHGEELEQRFNAWAAR--- |
| 4R6Y Chain:A ((1-317)) | ---SMESVVTVYSIDGLHD----------------------GDNSWYQVQFDAFTKATGITVRYVEGGGGVVVERLAKERTNPQADVLVTAPPFIQRAAAEKLLANFNT----DTASAIPDA-NNLYSPLVKNYLSFIYNSKLLKTAPASWQDLLD-GKFKNK------LQYSTPGQAADGTAVMLQAFHSF----GSKDAGFAYLGKLQAN----NVGPSASTGKLTALVNKGEIYVANGDLQMNLAQMERNPNVKIFWPANDKGERSALAIPYVIGLVQGAPQSENGKKLINFLLSKEAQTRVSELSWGMPVRSDV-----TPSDEHYKAATAALEGVQSWQPN-WDDVAVSLSADISRWHKVTES |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R6Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -30676 for 2541 contacts (-12.1/contact) +
2D Compatibility (PS) -32598 + (NN) -16915 + (LL) 4564
1D Compatibility (HY) -9600 + (ID) 3400
Total energy: -88625.0 ( -34.88 by residue)
QMean score : 0.386
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