Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEAIAKYDFKATADDELSFKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYIEMKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRSTSVSRNQQIFLRDIEQVPQQPTYVQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWKGACHGQTGMFPRNYVTPVNRNV
3N7Y Chain:B ((1-98))
------------------------------------------------------MKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRSTSVSRNQQIFLRDIE-----------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3N7Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58702 for 656 contacts (-89.5/contact) +
2D Compatibility (PS) -10575 + (NN) -6544 + (LL) 5912
1D Compatibility (HY) -13600 + (ID) 4900
Total energy: -88409.0 ( -134.77 by residue)
QMean score : 0.301
(partial model without unconserved sides chains):
PDB file :
Tito_3N7Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3N7Y-query.scw
PDB file :
Tito_Scwrl_3N7Y.pdb
: