Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLLLLAALLTAGAAAHSISPRAVWQFRNMIKCTIPGSDPLKDYNNYGCYCGLGGWGTPVDDLDRCCQTHDHCYSQAKKLESCKFLIDNPYTNTYSYSCSGSEITCSAKNNKCEDFICNCDREAAICFSKVPYNKEYKNLDTGKFC
1BP2 Chain:A ((1-119))
----------------------ALWQFNGMIKCKIPSSEPLLDFNNYGCYCGLGGSGTPVDDLDRCCQTHDNCYKQAKKLDSCKVLVDNPYTNNYSYSCSNNEITCSSENNACEAFICNCDRNAAICFSKVPYNKEHKNLD-----
General information:
TITO was launched using:
RESULT:
Template:
1BP2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55831 for 876 contacts (-63.7/contact) +
2D Compatibility (PS) -12550 + (NN) -7552 + (LL) 2356
1D Compatibility (HY) -16000 + (ID) 4800
Total energy: -94377.0 ( -107.74 by residue)
QMean score : 0.369
(partial model without unconserved sides chains):
PDB file :
Tito_1BP2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BP2-query.scw
PDB file :
Tito_Scwrl_1BP2.pdb
: