Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKP
3SU8 Chain:A ((1-136))
MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTP
General information:
TITO was launched using:
RESULT:
Template:
3SU8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65292 for 934 contacts (-69.9/contact) +
2D Compatibility (PS) -14854 + (NN) -9945 + (LL) 0
1D Compatibility (HY) -20000 + (ID) 5150
Total energy: -115241.0 ( -123.38 by residue)
QMean score : 0.510
(partial model without unconserved sides chains):
PDB file :
Tito_3SU8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3SU8-query.scw
PDB file :
Tito_Scwrl_3SU8.pdb
: