Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDLPSRTVDTKQAQDLARSYGIPFIETSAKTRQRVEDAFYTLVREIRQYRLKKISKEEKTPGCVKIKKCIIM
4EPX Chain:A ((2-170))
MTEYKLVVVGAVGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKSDLPSRTVDTKQAQDLARSYGIPFIETSAKTRQGVDDAFYTLVREIRKHKEK--------------------
General information:
TITO was launched using:
RESULT:
Template:
4EPX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -89927 for 1354 contacts (-66.4/contact) +
2D Compatibility (PS) -18639 + (NN) -8457 + (LL) 1632
1D Compatibility (HY) -21600 + (ID) 8050
Total energy: -145041.0 ( -107.12 by residue)
QMean score : 0.513
(partial model without unconserved sides chains):
PDB file :
Tito_4EPX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EPX-query.scw
PDB file :
Tito_Scwrl_4EPX.pdb
: