Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRMLLALLALSAARPSASAESHWCYEVQAESSNYPCLVPVKWGGNCQKDRQSPINIVTTKAKVDKKLGRFFFSGYDKKQTWTVQNNGHSVMMLLENK---ASISGGGLPAPYQAKQLHLHWSDLPYKGSEHSLDGEHFAMEMHIVHEKEKGTSRNVKEAQDPEDEIAVLAFLVEAGTQVNEGFQPLVEALSNIPKPEMSTTMAESSLLDLLPKEEKLRHYFRYLGSLTTPTCDEKVVWTVFREPIQLHREQILAFSQKLYYD-KEQTVSMKDNVRPLQQLGQRTVIKSGAPGRPLPWALPALLGPMLACLLAGFLR |
| 3K34 Chain:A ((3-259)) | --------------------HHWGYGKHNGPEHWHKDFP-----IAKGERQSPVDIDTHTAKYDPSLKPLSVS-YDQATSLRILNNGHAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHWNTK--YGDFGKAVQQPDGLAVLGIFLKVGS-AKPGLQKVVDVLDSIKTKGKSADFTNFDPRGLLPES---LDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVDNWRPAQPLKNRQIKASF--------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K34.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -79452 for 2089 contacts (-38.0/contact) +
2D Compatibility (PS) -26493 + (NN) -7323 + (LL) 4144
1D Compatibility (HY) -16000 + (ID) 4300
Total energy: -129424.0 ( -61.96 by residue)
QMean score : 0.302
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