Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNVPHKSSLPEGIRPGTVLRIRGLVPPNASRFHVNLLCGEEQGSDAALHFNPRLDT---SEVVFNSKEQGSWGREERGPGVPFQRGQPFEVLIIASDDGFKAVVGDAQYHHFRHRLP-LARVRLVEVGGDVQLDSVRIF
3ZSJ Chain:A ((2-135))
-LIVPYNLPLPGGVVPRMLITILGTVKPNANRIALDFQRG----NDVAFHFNPRFNENNRRVIVCNTKLDNNWGREERQSVFPFESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKLNEISKLGISGDIDLTSASY-
General information:
TITO was launched using:
RESULT:
Template:
3ZSJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82446 for 973 contacts (-84.7/contact) +
2D Compatibility (PS) -13814 + (NN) -4375 + (LL) 496
1D Compatibility (HY) -11200 + (ID) 2400
Total energy: -113739.0 ( -116.90 by residue)
QMean score : 0.609
(partial model without unconserved sides chains):
PDB file :
Tito_3ZSJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZSJ-query.scw
PDB file :
Tito_Scwrl_3ZSJ.pdb
: