Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIGIIGAMEEEVTLLRDKIENRQTISLGGCEIYTGQLNGTEVALLKSGIGKVAAALGATLLLEHCKPDVIINTGSAGGLAPTLKVGDIVVSDEARYHDADVTAFGYEYGQLPGCPAGFKADDKLIAAAEACIAELNLNAVRGLIVSGDAFINGSVGLAKIRHNFPQAIAVEMEATAIAHVCHNFNVPFVVVRAISDVADQQSHLSFDEFLAVAAKQSSLMVESLVQKLAHG
3BL6 Chain:A ((2-230))
MMIGIIGAMEEEVTILKNKLTQLSEISVAHVKFYTGILKDREVVITQSGIGKVNAAISTTLLINKFKPDVIINTGSAGALDESLNVGDVLISDDVKYHDADATAFGYEYGQIPQMPVAFQSSKPLIEKVSQVVQQQQLTAKVGLIVSGDSFIGSVEQRQKIKKAFPNAMAVEMEATAIAQTCYQFNVPFVVVRAVSDLANGEAEMSFEAFLEKAAVSSSQTVEALVSQL---
General information:
TITO was launched using:
RESULT:
Template:
3BL6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -175460 for 2066 contacts (-84.9/contact) +
2D Compatibility (PS) -25075 + (NN) -17915 + (LL) 16
1D Compatibility (HY) -25200 + (ID) 6250
Total energy: -249884.0 ( -120.95 by residue)
QMean score : 0.736
(partial model without unconserved sides chains):
PDB file :
Tito_3BL6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BL6-query.scw
PDB file :
Tito_Scwrl_3BL6.pdb
: