Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMADPRPDPDELARRAAQVIADRTGIGEHDVAVVLGSGWLPAVAALGSPTTVLPQAELPGFVPPTAAGHAGELLSVPIGAHRVLVLAGRIHAYEGHDLRYVVHPVRAARAAGAQIMVLTNAAGGLRADLQVGQPVLISDHLNLTARSPLVGG-------EFVDLTDAYSPRLRELA----RQSDPQLAEGVYAGLPGPHYETPAEIRMLQTLGADLVGMSTVHETIAARAAGAEVLGVSLVTNLAAGITGEPLSHAEVLAAGAASATRMGALLADVIARF
3ODG Chain:A ((13-284))------DFNELPFQAVKYIQKIKPGFKPQIAFILGSGLGDLVDQITNDT-TISYADIPGFPVSSVHGHAGELVLGDLCGVPVMCMKGRGHFYEGKGMSIMTNPVRTFKLMGCEFLFCTNAAGSLRPEVLPGSVVMLKDHINTMPGTPLVGPNDDRFGPRFFSLANAYDKDLRADMAKIAQQLDIPLTEGVFVSYPGPCFETPAEIRMMQIIGGDVVGMSVVPEVLSAAHCGLKVIALTAITNLAEGLSDVVLSHEQTLKFAKVASVNFTKLIEAFLKSK


General information:
TITO was launched using:
RESULT:

Template: 3ODG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -187513 for 2235 contacts (-83.9/contact) +
2D Compatibility (PS) -28395 + (NN) -8373 + (LL) 148
1D Compatibility (HY) -22400 + (ID) 4700
Total energy: -251233.0 ( -112.41 by residue)
QMean score : 0.691

(partial model without unconserved sides chains):
PDB file : Tito_3ODG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3ODG-query.scw
PDB file : Tito_Scwrl_3ODG.pdb: