Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MADEIAKAQVARPGG-DTIFGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKHISQISVAEDDDESLLGHLMIVGKKCAADLG-L--NK-GYRMVVNEGSDGGQSVYHVHLHVLGGRQMHWPPG
3O0M Chain:A ((3-111))
-------------GSMSCVFCAIVSGDAPAIRIYEDENFLGILDIRPFTRGHTLVIPKTHTVDLTDTP---PETVAGMAAVGQRIARAARESGLHADGNNIAINDGKAAFQTVFHIHLHVVPRRN------
General information:
TITO was launched using:
RESULT:
Template:
3O0M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -77319 for 739 contacts (-104.6/contact) +
2D Compatibility (PS) -11267 + (NN) -8359 + (LL) 1080
1D Compatibility (HY) -5600 + (ID) 1650
Total energy: -103115.0 ( -139.53 by residue)
QMean score : 0.429
(partial model without unconserved sides chains):
PDB file :
Tito_3O0M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3O0M-query.scw
PDB file :
Tito_Scwrl_3O0M.pdb
: