Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVVPIRIVGDPVLHTATTPVTVAADGSLPADLAQLIATMYDTMDAANGVGLAANQIGCSLRLFVYDCAADRAMTARRRGVVINPVLET-SEIPETMPDPDTDDEGCLSVPGESFPTGRAKWARVTGLDADGSPVSIEGTGLFARMLQHETGHLDGFLYLDRLIGRYARNAKRAVKSHGWGVPGLSWLPGEDPDPFGH
3UWB Chain:A ((2-150))
--SLKIKTIGDRCLRQKSEEVEF-----DKKEMSELYDQMCEAMWASDGIGLAAPQVGINKRVIVVDETTEEHGK--YAHLMVNPKITWKSE------EKVLFDEGCLSVPDQNGEVLRPKSIKVTFQNKDGKYKKWKLDGLAARVVQHEIDHLEGILFVDYFN----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3UWB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71528 for 1139 contacts (-62.8/contact) +
2D Compatibility (PS) -15540 + (NN) -350 + (LL) 1340
1D Compatibility (HY) -10400 + (ID) 2450
Total energy: -98928.0 ( -86.86 by residue)
QMean score : 0.297
(partial model without unconserved sides chains):
PDB file :
Tito_3UWB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UWB-query.scw
PDB file :
Tito_Scwrl_3UWB.pdb
: