Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
YSLFPNSPKWTSKVVTYRIVSYTRDLPHITVDRLVSKALNMWGKEIPLHFRKVVWGTADIMIGFARGAHGDSYPFDGPGNTLAHAFAPGTGLGGDAHFDEDERWTDGSSLGINFLYAATHELGHSLGMGHSSDPNAVMYPTYGNGDPQNFKLSQDDIKGIQKLYGKRSNSRKK
1I76 Chain:A ((1-163))
-MLTPGNPKWERTNLTYRIRNYTPQLSEAEVERAIKDAFELWSVASPLIFTRISQGEADINIAFYQRDHGDNSPFDGPNGILAHAFQPGQGIGGDAHFDAEETWTNTS-ANYNLFLVAAHEFGHSLGLAHSSDPGALMYPNYAFRETSNYSLPQDDIDGIQAIYG--------
General information:
TITO was launched using:
RESULT:
Template:
1I76.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -70459 for 1255 contacts (-56.1/contact) +
2D Compatibility (PS) -17669 + (NN) -12365 + (LL) 320
1D Compatibility (HY) -12000 + (ID) 4100
Total energy: -116273.0 ( -92.65 by residue)
QMean score : 0.752
(partial model without unconserved sides chains):
PDB file :
Tito_1I76.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1I76-query.scw
PDB file :
Tito_Scwrl_1I76.pdb
: