Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKLLRLCCWYS-----WL-LLFYYNFQVRGVYSRSQDHPGFQVLAS---ASHYWPLENVDGIHELQDTTGDIVEGKVNKGIYLKEEK------GVTLLYYGRYNSSCISKPEQCGPEGVTFSFFWKTQGEQSRPIPSAYGGQVISNGFKVCSSGGRGSVELYTR---DNSMTWEASFSPPGPYWTHVLFTWKSKEGLKVYVNGTLSTSDPSGKVSRDYGESNVNLVIGSEQDQAKCYENGAFDEFIIWERALTPDEIAMYFTAAIGKHALLSSTLPSLFMTSTASPVMPTDAYHPIITNLTEERKTFQSPGVILSYLQNVSLSLPSKSLSEQTALNLTKTFL----KAVGEILLLPGWIALSEDSAVVLSLIDTIDTVMGHVSSNLHGSTPQVTVEGSSAMAEFSVAKILPKTVNSSHYRFPAHGQSFIQIPHEAFHRHAWSTVVGLLYHSMHYYLNNIWPAHTKIAEAMHHQDCLLFATSHLISLEVSPPPTLSQNLSGSPLITVHLKHRLTRKQHSEATNSSNRVFVYCA--FLDFSSGEGVWSNH----GCALTRGNLTYSVCRCTHLTNFAILMQVVPLELARGHQVALSSISYVGCSLSVLCLVATLVTFAVLSSVSTIRNQRYHIHA-----------NLSFAVLVAQVLLLISFRLEPGTTPCQVMAVLLHYFFLSAFAWMLVEGLHLYSMVIKVFGSEDSKHRYY-YGMGWGFPLLICIISLSFAMDSYGTSNNCWLSLASGAIWAFVAPALFVIVVNIGILIAVTRVISQISADNYKIHGDPSAFKLTAKAVAVLLPILGTSW----VFGVLAVNGCAVVFQY-----MFATLNSLQG--LFIFLFHCLLNSEVRAAFKHKTKVWSLTSSSARTSNAKPFHSDLMNGTRPGMASTKLSPWDKSSHSAHRVDLSAV |
| 4UFC Chain:A ((21-807)) | -----DLKLWYSQPAQNWSEALPIGNSRLGAMVYGGIEREELQLNEETFWAGSPYNNNNPNAVHVLPVVRKLIFEGRNKEAQRLIDANFLTQQHGMSYLTLG---SLYLEFPEHQNGSG-----FYRDLNLENATTTTRYQVDDVTYTRTTFASFTDNVIIMHIKASKANALNFTIAYNCPLVHKVNVQ-----NDQLTVTCQGK----EQEGLKAALRAECQIQVKTNGTLRPAG-------NTLQINE----GTEATLYISAAT--------NYVN-YQDVSADESHRTSEYLKRAMQIPYEKALKNHIAYYKKQFDRVRLTLPAGKASQLETPKRIENFGNGEDMAMAALLFHYGRYLLISSSQP------------GGQPANLQG------IWNNSTHAPWD-SKYTI-NINTEMNYWPAEV-TNLSETHSPLFSMLKDLSVTGAETARTMYDCRGWVAH-------HNTDLWRICG-------VVDFAAAGMWPSGGAWLAQHIWQHYLFTGNKEFLKEYYPILKGTAQFYMDFLVEHPVYKWLVVSPSVSPEHGPITAGCTMDNQIAFDALHNTLLASYIAGEAPSFQDSLKQTLEKLPPMQIGKHNQLQEWLEDIDNPKDEHRHISHLYGLYPSNQISPYSNPELFQAARNTLLQRGDKAT-------GWSIGWKVNFWARML-DGNHAFQIIKNMIQLLPNDHLAKEYPNGRTYPNM---------LD---------------------AHPPFQIDGNFGYTAGVAEMLLQ-----------------SHDGAVHLLPALPDAWEEGSVKGLVARGNFTVDMDWKNNVLNKAIIRSNIGSTLRIRSYVPLKGKGLKQVNGKECSNRLFATTPIK----QPLVAKGVSAQSPKL--QKVYEYDIETKAGKTYIVNTI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UFC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -435421 for 6543 contacts (-66.5/contact) +
2D Compatibility (PS) -76711 + (NN) -7209 + (LL) 10604
1D Compatibility (HY) -9200 + (ID) 6600
Total energy: -524537.0 ( -80.17 by residue)
QMean score : 0.215
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