Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGTEATEQVSWGHYSGDEEDAYSAEPLPELCYKADVQAFSRAFQPSVSLTVAALGLAGNGLVLATHLAARRAARSPTSAHLLQLALADLLLALTLPFAAAGALQGWSLGSATCRTISGLYSASFHAGFLFLACISADRYVAIARALPAGPRPSTPGRAHLVSVIVWLLSLLLALPALLFSQDGQREGQRRCRLIFPEGLTQTVKGASAVAQVALGFALPLGVMVACYALLGRTLLAARGPERRRALRVVVALVAAFV-------------VLQLPYSLALLLDTADLLAARERSCPASKRKDVALLVTSGLALARC-----GLNPVL--------YAFLGLRFR----------QDLRRLLRGGSCPSGPQPRRGCPRRPRLSSCSAPTETHSL-SWDN------------------------------------------------------------------------------------------------------ |
| 3ODU Chain:A ((37-502)) | -----------------------------PCFREENANFNKIFLPTIYSIIFLTGIVGNGLVILV-MGYQKKLRSMTDKYRLHLSVADLLFVITLPFWAVDAVANWYFGNFLCKAVHVIYTVNLYSSVWILAFISLDRYLAIVHATNS-QRPRKLLAEKVVYVGVWIPALLLTIPDFIFANVSEADDRYICDRFYP---NDLWVVVFQFQHIMVGLILPGIVILSCYCII-ISKLSHSGSNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYGSKGHQKRKALKTTVILILAFFACWLPYYIGISIDSFILLEIIKQGCEFENTVHKWISITEALAFFHCCLNPILYAFLGAKFKTSAQHALTSGRPLEVLFQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ODU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -115813 for 2200 contacts (-52.6/contact) +
2D Compatibility (PS) -34161 + (NN) -4634 + (LL) 1016
1D Compatibility (HY) -21200 + (ID) 4150
Total energy: -178942.0 ( -81.34 by residue)
QMean score : 0.147
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