Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNESRWTEWRILNMSSGIVNVSERHSCPLGFGHYSVVDVCIFETVVIVLLTFLIIAGNLTVIFVFHCAPLLHHYTTSYFIQTMAYADLFVGVSCLVPTLSLL-HYSTGVHESLTCQVFGYIISVLKSVSMACLACISVDRYLAITKPLSYNQL---VTPCRLRICIILIWIYSCLIFLPSFFGWGKPGYHGDIFEWCATSWLTSAYFTGFIVCLLYAPAAFVVCFTYFHIFKICRQHTKEINDRRAR-F--------P-S-------------------------------H-----------------------------------------------------------------------E---------------VD---S------------SRETGHSPDRRYAMVLFRITSVFYMLWLPYIIYFLLESSRVL--DNPTLSFLTTWLAISNSFCNCVIYSLSNSVFRLGLRRLSETMCTSCMCVKDQEAQEPKPRKRANSCSI |
| 3PBL Chain:A ((41-471)) | ------------------------------------------YALSYCALILAIVFGNGLVCMAVLKERAL-QTTTNYLVVSLAVADLLVATLVMPWVVYLEVTGGVWNFSRICCDVFVTLDVMMCTASIWNLCAISIDRYTAVVMPVHYQHGTGQSSCRRVALMITAVWVLAFAVSCPLLFGFNTTG----DPTVCSISNP--DFVIYSSVVSFYLP-FGVTVLVYARIYVVLKQRRRKNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYGVPLREKKATQMVAIVLGAFIVCWLPFFLTHVLNTHCQTCHVSPELYSATTWLGYVNSALNPVIYTTFNIEFRKAFLKILSC--------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PBL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -286209 for 2093 contacts (-136.7/contact) +
2D Compatibility (PS) -28170 + (NN) 1397 + (LL) 4376
1D Compatibility (HY) -16000 + (ID) 3250
Total energy: -327856.0 ( -156.64 by residue)
QMean score : 0.313
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