Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVSVNSSHCFY--NDSFKYTLYGCMFSMVFVLGLISNCVAIYIFICVLKVRNETTTYMINLAMSDLLFVFTLPFRIFYFTTRNWPFGDLLCKISVMLFYTNMYGSILFLTCISVDRFLAIVYPFKSKTLRTKRNAKIVCTGVWLTVIGGSAPAVFVQSTHSQGNNASEACFENFPEATWKTYLSRIVIFIEIVGFFIPLILNVTCSSMVLKTLTKPV--TLSRSKINKTKVLKMI-----FVHLIIFCFCFVPYNINLILYSLVRT--------------QTFVNCSVVAAVRTMY------PITLCI-AVSNCCFDPIVYYFTSDTI---QNSIKM---KNWSVRRSDFRFSEVHGA-ENFIQHNLQTLKSKIFDNESAA-------------------------------------------------------------------------------------------------- |
| 3ODU Chain:A ((37-502)) | -------PCFREENANFNKIFLPTIYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFVITLPFWAVDAVA-NWYFGNFLCKAVHVIYTVNLYSSVWILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIFANVSEADD--RYICDRFYPNDLWVVVFQFQHIMVG---LILPGIVILSCYCIIISKLSHSGSNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYGSKGHQKRKALKTTVILILAFFACWLPYYIGISIDSFILLEIIKQGCEFENTVHKWISITEALAFFHCCLNPILYAFLGAKFKTSAQHALTSGRPLEVLFQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ODU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -217929 for 2271 contacts (-96.0/contact) +
2D Compatibility (PS) -33245 + (NN) 522 + (LL) 816
1D Compatibility (HY) -28000 + (ID) 4150
Total energy: -281986.0 ( -124.17 by residue)
QMean score : 0.174
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