Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDNASFSEPWPANASGPDPALSCSNASTLAPLPAPLAVAVPVVYAVICAVGLAGNSAVLYVLLRAPRMKTVTNLFILNLAIADELFTL-VLPINIADFLLRQWPFGELMCKLIVAIDQYNTFSSLYFLTVMSADRYLVVLATAESRRVAGRTYSAARAVSLAVWGIVTLVVLPFAVFARLDDEQGRRQCVLVFPQPEA-FWWRASRLYTLVLGFAIPVSTICVLYTTLLCRLHAMRLDSH----AKALERAKKRVTFLVVAILAVCLLCWTPYHLSTVVALTTDLPQ-TPLVIAISYFITSLSYANSCLNPFLYAFLDASFRRNLRQLITCRAAA |
| 2KS9 Chain:A ((33-324)) | -------------------------------------VLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPLQPR--L--SATATKVVICVIWVLALLLAFPQGYYSTTETMPSRVVCMIEWPEHPNKIYEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWASEIPGDSSDRYHEQVSAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYINPDLYLKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCCPFI |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KS9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -225713 for 2224 contacts (-101.5/contact) +
2D Compatibility (PS) -29241 + (NN) -12633 + (LL) 1072
1D Compatibility (HY) -27600 + (ID) 3200
Total energy: -297315.0 ( -133.68 by residue)
QMean score : 0.262
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