Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------MDKINQTFVREFI---LLGLSGYP--------------KLEIIFFALILVMYVVILIGNGVLI-----------IASILDSRL---------------------HMPM-YFFLGNLSFLDICYTTSS----------IPSTLVSLISKKRNISFSGCAVQMFFGFAMGSTECFLLGMMA--------------FDRYVAICNP--------------LRYPIIMNKVVYVLLTSVS--WLSGGINSTVQTSLAMRWPF--CGNNIINH-----FLCEILAVLKLACSDISVNIVTLAVSNIAFLVLPLLVIFFSYMFILYTILRTNSATGRHKAFSTCSAHLTVVIIFYGTIFFMYAKPKSQDLLGKDNLQATEGLVSMFYGVVTPMLNP----IIYSLRNKDVKAAIKYLLSRKAINQ-------------------------------------------- |
| 4MGR Chain:A ((2-469)) | DITITLDRSEQADYIYQQIYQKLKKEILSRNLLPHSKVPSKRELAENLKVSVNSVNSAYQQLLAEGYLYAIERKGFFVEELDMFSAEEHPPFALPDDLKEIHIDQSDWISFSHMSSDTDHFPIKSWFRCEQKAASRSYRTLGDMSHPQGIYEVRAAITRLISLTRGVKCR--PEQMIIG---AGTQVLMQLLTELLPKEAVYAMEEPGYRRMYQLLKNAGKQVKTIMLDEKGMSIAEITRQQPDVLVTTPSHQFPSGTIMPVSRRIQLLNWAAEEPRRYIIEDDYDSEFTYDVDSIPALQSLDRFQNVIYMGTFSKSLL--PGLRI--SYMVLPPELLRAYKQRGYDLQTCSSLTQLTLQEFIESGEYQKHIKKMKQHYKEKRE-RLITALEAEFSGEVTVKGANAGLHFVTEFDTRRTEQDILSHAAGLQLEIFGMSRFNLKENKRQTGRPALIIGFARLKEEDIQEGVQRLFKAVY |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MGR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -264452 for 2001 contacts (-132.2/contact) +
2D Compatibility (PS) -32329 + (NN) -2509 + (LL) 1176
1D Compatibility (HY) -8400 + (ID) 3100
Total energy: -309614.0 ( -154.73 by residue)
QMean score : 0.178
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