Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSSSGSSHPFLLTGFPGLEEAHHWISVFFLFMYISILFGNGTLLLLIKEDHNLHEPMYFFLAMLAATDLG---LALTTMPTVLGVLWLDHREIGSAACFSQAYFIHSL--SFLESGILLAMAYDRFIAICNPLRYTSVLTNTRVVKIG--------------LGVLMRGFVSVVPPIRPLYFFLYCHSHVLSHAFCLHQDVI--KLACADTTFNRLYPAVLVVF----------IFVLDY-----LIIFISYVLILKTVLSIASREERAKALITCVS------HICCVLVFYVTVIGLSLIHRFGKQVPHIVHLIMSYAYFLFPPL-------MNPITYSVKTKQIQNAILHLFTTHRIGT |
| 3ZPJ Chain:A ((1-356)) | MTTLEEINLLVERGY--YEEALAKVYEIEDPIEQVQVLTKIVVTIYQHDGPMEWIPSIMEDAMYIAKKLRDPANKAVAYSIIASTLAIMEYEEDAMDFFNRAIDEANEIESPIEKGMVLSTLAYHLAIAGYPDNALEIFNIAFDTIIGAETSYTHKVDGILRIGDLLEKAGDTLPSNEAMDFYKMAFDIFDKLHVNQRAAIVEKKIELAKTVYDVGLPQIRAALLKGKNHYALAIIKKKYSGVMRLIGELEVALWMKRVNNMEYLDVVDKAFECCESPRFTDVNVQHIARLLTELGNLRRALKFAKEIQNIHKRSEALKAIALELVRRKKFEEVKKIIESIPDPKIREEALNEIGTIE--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3ZPJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -314932 for 2387 contacts (-131.9/contact) +
2D Compatibility (PS) -31470 + (NN) -9545 + (LL) -228
1D Compatibility (HY) -4000 + (ID) 2450
Total energy: -362625.0 ( -151.92 by residue)
QMean score : 0.255
|
|
|