Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLQNQDTMEILSNSTSKFPTFLLTGIP---GLESAHVWISIPFCCFYAIALSGNSVIL----FVIITQQSLHEPMYYFLFRLSATDLGLTVSSLST-TLGILWFEAREISLYSCI-------VQMFFLHG-----------FTFMES-GVLVATAFDRYVAICDPLRYTTILTNSRIIQMGLLMI--TRAIVLILP---LLLLLKPLYFCRMNALSHSYCYHPDVIQLACSDIRANSICGLIDLILTTGIDTPCIVLSYILIIHSVLRIASPEEWHKVFSTCVS---------HVGAVAFFYIHMLSLSLVYRYGRSAPRVVHSVMA--------------------NVYLLLPPVLNPIIDSVKTKQIRKAMLSLLLTK----------------------------------------------------------------------- |
| 4YHC Chain:A ((2-468)) | GWSDHDELS--TDTTLHEEKFRIEPVPVHHQLDILKIAVSENYKTFASVGLDRSLVVWDLRQWCTKLVLS-KEQMPRTLKAIALDPQGNYVSLFSKDTLFILNVESPSLMLQHSYHSKPNSKLNVFWMPGTHKDDEWKNFELVVVESSGEIQVFSLTIEIEGADIALVEKFQLSSPIIKSISIVSPTANRIASLTESGEVTVYSKKGPVWSPKILSQNKNYLTETKK----DIYGIAMADILFLARDSGVDMIDLKNDELLHSFTLPPIKVNT-----FSVGVSNSRFVNGQFRVSSISFCFTHAVTEKVLYYYYGNESNESYIILNKWDQQPNLVDVHDPDNSLASLTFDELQENIHEVEDASESVMSSDGLYIFGMRRKSSSGISGETQVWEVWMYSQSEKKHRSKSLKMYNSLIIADPGPSLAVSDRCVAIVLGNYVALVGYGSEIFR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YHC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -289427 for 2243 contacts (-129.0/contact) +
2D Compatibility (PS) -32359 + (NN) 7075 + (LL) 1464
1D Compatibility (HY) -9200 + (ID) 2750
Total energy: -325197.0 ( -144.98 by residue)
QMean score : 0.087
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