Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTETSLSSQCFPMSVLNNTIAEPLIFLLMGIPG-----LKATQYWIS---IPFCLLYVVAV-SGNSMI-----LFVVLCER--------SLHKPMYYFLSMLSATDLSLSLCTLSTTLGVFWFEAREINLNACIAQMFFLHGFTFMESGV-------LLAMAFDRFVAI----CYPL-RYTTILTNARIAKIGMSMLIRNVAVMLPVMLFVKRLSF---CSSMVLSHSYCYHVDLIQLSC--------TDNRINSIL---GLFALLST-------------TGFDCPC-ILLSYILIIRSVLSIASSEERRKAF----NTCTSHISAVSIFY---LPLISLSLVHRYGHSAPPFVHIIMANVFLLIPPVLNPII---------------YSVKIKQIQKA--------IIKVLIQKHSKSNHQLFLIRDKAIYE |
| 4Q6O Chain:A ((21-437)) | MIEKAPTN-------VEDRDKAPHLLLLAGIQGDEPGGFNATNLFLMHYSVLKGLVEVVPVLNKPSMLRNHRGLYGDMNRKFAALDKNDPEYPTIQEIKSLIAKPSID-AVLHLHDGGGYY----RPVYVDAMLNPKRWGNCFIIDQDEVKGAKFPNLLAFANNTIESINAHLLHPIEEYHLKNTRTAQGDTEMQKALTFYAINQKKSAFANEASKELPLASRVFYHLQAIEGLLNQLNIPFKRDFDLNPNSVHALINDKNLWAKISSLPKMPLFNLRPKLNHFPLPHNTKIPQIPIESNAYIVGLVKNKQEVFLKYGNKLMTRLSPFYIEFDPSLEEVKMQIDNKDQMVKIGSVVEVKESFYIHAMDNIRANVIGFSVSNENKPNEAGYTIKFKDFQKRFSLDKQERIYRIEFYKNNAFSGMILVKFV----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q6O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -341883 for 2416 contacts (-141.5/contact) +
2D Compatibility (PS) -33888 + (NN) 3409 + (LL) 1860
1D Compatibility (HY) -15600 + (ID) 3150
Total energy: -389252.0 ( -161.11 by residue)
QMean score : 0.172
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